Source: ALL
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs998592
rs998592
CLEC16A
0.700 GeneticVariation GWASDB A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene. 17632545

2007
dbSNP: rs9976767
rs9976767
UBASH3A
C 0.800 GeneticVariation GWASDB Follow-up analysis of genome-wide association data identifies novel loci for type 1 diabetes. 18840781

2009
dbSNP: rs9976767
rs9976767
UBASH3A
C 0.800 GeneticVariation GWASCAT Follow-up analysis of genome-wide association data identifies novel loci for type 1 diabetes. 18840781

2009
dbSNP: rs9939609
rs9939609
FTO
0.010 GeneticVariation BEFREE The aim of this study was to evaluate the prevalence of cardiovascular disease risk factors as well as the fat mass and obesity associated (FTO) gene rs9939609 variant in a large group of children with T1DM of the same ethnic-Polish origin. 25184161

2014
dbSNP: rs9933507
rs9933507
CLEC16A
0.700 GeneticVariation GWASDB A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene. 17632545

2007
dbSNP: rs9924471
rs9924471
SGF29
0.700 GeneticVariation GWASDB A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci. 21980299

2011
dbSNP: rs9810233
rs9810233 		G 0.700 GeneticVariation GWASCAT Pilot genome-wide association search identifies potential loci for risk of erectile dysfunction in type 1 diabetes using the DCCT/EDIC study cohort. 22704111

2012
dbSNP: rs9784758
rs9784758 		0.700 GeneticVariation GWASDB A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene. 17632545

2007
dbSNP: rs9729
rs9729
VDR
0.010 GeneticVariation BEFREE The haplotypes "CG" (Taq I-Apa I), "CGG" (Taq I-Apa I-Tru I), "CGC" (Taq I-Apa I-Fok I), "GCTG" (rs9729-Taq I-Apa I-Tru I), and "CGGC"(Taq I-Apa I, Tru I, Fok I) were less often transmitted, thus negatively associated with type 1 diabetes. 17130574

2006
dbSNP: rs9640279
rs9640279
GIMAP4
0.010 GeneticVariation BEFREE A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899. 25964488

2015
dbSNP: rs9585056
rs9585056
LOC107984558
C 0.710 GeneticVariation GWASCAT Fine mapping of type 1 diabetes susceptibility loci and evidence for colocalization of causal variants with lymphoid gene enhancers. 25751624

2015
dbSNP: rs9585056
rs9585056
LOC107984558
0.710 GeneticVariation BEFREE The human locus controlling the IDIN was associated with the risk of T1D at single nucleotide polymorphism rs9585056 (P = 7.0 × 10(-10); odds ratio, 1.15), which was one of five single nucleotide polymorphisms in this region associated with EBI2 (GPR183) expression. 20827270

2010
dbSNP: rs9501626
rs9501626 		0.700 GeneticVariation GWASDB A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene. 17632545

2007
dbSNP: rs9501239
rs9501239 		0.700 GeneticVariation GWASDB A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene. 17632545

2007
dbSNP: rs947474
rs947474
LINC02649 ; LINC02656
G 0.800 GeneticVariation GWASDB Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci. 18978792

2008
dbSNP: rs947474
rs947474
LINC02649 ; LINC02656
G 0.800 GeneticVariation GWASCAT Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci. 18978792

2008
dbSNP: rs9461799
rs9461799 		0.700 GeneticVariation GWASDB A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene. 17632545

2007
dbSNP: rs941758
rs941758
PF4V1
0.010 GeneticVariation BEFREE We observed protective associations between three variants in the CXCL4L1 promoter (rs872914/A, rs941757/G, and rs941758/A) and renal function in patients with type 1 diabetes. 30593538

2019
dbSNP: rs941576
rs941576
MEG3
0.820 GeneticVariation BEFREE Analysis of the paternally expressing delta-like 1 homologue (DLK1) shows that the paternal transmission of type 1 diabetes protective G allele of rs941576 single nucleotide polymorphism (SNP) results in significantly reduced birth weight (-132 g). 25602077

2015
dbSNP: rs941576
rs941576
MEG3
A 0.820 GeneticVariation GWASDB Using imputation to extend existing GWA datasets, we have obtained robust evidence at rs941576 for paternally inherited risk of type 1 diabetes (T1D; ratio of allelic effects for paternal versus maternal transmissions = 0.75; 95% confidence interval (CI) = 0.71-0.79). 19966805

2010
dbSNP: rs941576
rs941576
MEG3
0.820 GeneticVariation BEFREE Using imputation to extend existing GWA datasets, we have obtained robust evidence at rs941576 for paternally inherited risk of type 1 diabetes (T1D; ratio of allelic effects for paternal versus maternal transmissions = 0.75; 95% confidence interval (CI) = 0.71-0.79). 19966805

2010
dbSNP: rs941576
rs941576
MEG3
A 0.820 GeneticVariation GWASCAT Using imputation to extend existing GWA datasets, we have obtained robust evidence at rs941576 for paternally inherited risk of type 1 diabetes (T1D; ratio of allelic effects for paternal versus maternal transmissions = 0.75; 95% confidence interval (CI) = 0.71-0.79). 19966805

2010
dbSNP: rs9388489
rs9388489
CENPW
G 0.800 GeneticVariation GWASCAT Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes. 19430480

2009
dbSNP: rs9388489
rs9388489
CENPW
G 0.800 GeneticVariation GWASDB Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes. 19430480

2009
dbSNP: rs9378200
rs9378200 		0.700 GeneticVariation GWASDB A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene. 17632545

2007